Package edu.iastate.metnet.hivemindService

Interface Summary

ExportToMetaOmGraph

Interface implemented by HiveMind service to export data to MetaOmGraph

Class Summary

AnnotationService	HiveMind service provides annotation and ontology data (mostly used by BirdsEyeView)
BareBonesBrowserLaunch
Browser	HiveMind service opens AtGeneSearch/AtMetaboliteSearch webpage to search for a gene/metabolite
CompareInPathBinder	HiveMind Service search for common sentences between two genes
CytoscapeHMService	Class used to translate the JUNG graphs recieved from MetNetDB to CyNetwork Objects that can be displayed in Cytoscape
ExploRaseExportObj	Class represnts a export Object that is used to send data to ExploRase.
ExportJungPathway	HiveMind Service exports pathway as JUNG graphs
ExportToBirdsEyeView	HiveMind Service exports data to BirdseyeView
ExportToExploRase	Class exports data from a MetNet application to ExploRase
ExportToMetaOmGraphImpl	Class implements ExportToMetaOmGraph interface and export data to MetaOmGraph.
Launcher	HiveMind service that launchs MetNet applications
PathwayService	HiveMind Service to get Pathway Category Tree
RequestGene	Class used to request gene data.
RequestGeneData	HiveMind service searches for gene information given the gene ID.
SearchByPubMed	HiveMind service searches documents for a gene using PubMed
SimpleGeneObj	contains gene id and id type, with no annotation data